Infectious Diseases

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Acinetobacter species

Actinomycosis

Acute Community-Acquired Pneumonia (CAP and VAP/HAP)

Adenovirus

Agents of Mucormycosis (Clinical Condition)

Agents of Mucormycosis (Microbiology)

Agents of Mycetoma

Alimentary Tract Disease in the HIV Patient: Diarrheal Diseases

Alimentary Tract Disease in the HIV Patient: Esophageal Diseases and Swallowing Disorders

Anthrax and Microbiology of B. anthracis

Appendicitis

Aseptic meningitis

Aspergillus species

BK Polyomavirus (Microbiology)

BK virus (Clinical Condition)

Babesia

Bacterial Lung Abscess

Bacterial Meningitis

Bacterial vaginosis

Bartonella syndromes

Bites including human and animal

Blastomyces dermatitidis

Borrelia burgdorferi including Lyme disease

Botulism

Brain Abscess

Brucella species

Brucellosis

Campylobacter jejuni and fetus

Candida

Candida Vulvovaginitis

Cardiovascular Implantable Electronic Device (CIED) Infection

Cellulitis, Necrotizing Fasciitis, Subcutaneous Tissue Infections

Cervicitis

Cestodes (Tapeworm)

Chikungunya Fever

Chlamydia Pneumoniae (Chlamydophila)

Chlamydia Psittaci (Chlamydophila)

Chlamydia trachomatis

Chronic Obstructive Pulmonary Disease (COPD) and Acute Exacerbations

Chronic Pneumonia (not TB)

Clostridia (other pathogenic strains C. perfringens, C. septicum)

Coagulase negative Staphylococci

Coccidioidomycosis

Condyloma accuminata and other genital lesions due to human papilloma virus

Conjunctivitis

Conjunctivitis

Coronaviruses (including SARS)

Corynebacterium diphtheria

Coxiella Burnetti

Cryptococcus neoformans

Cryptosporidium

Cystitis

Cytomegalovirus

Disseminated fungal infection

Dyslipidemia in the HIV Patient

Ehrlichia and Anaplasma

Encephalitis

Endocarditis IVDA

Endophthalmitis

Entamoeba

Enteric fever

Enterobacteriaceae

Enterococcus, Streptococcus gallolyticus group (formerly Streptococcus bovis)

Enteroviruses including poliovirus, echovirus, coxsackievirus

Epstein-Barr Virus (EBV)

Erysipelothrix

Evaluating Adherence to Antiretroviral Therapy and Managing the Sub-Optimally Adherent HIV Patient

Evaluation and Management of the Newly Diagnosed HIV Patient

Evaluation and management of acute HIV

Fever and Fever of Unknown Origin (FUO)

Fever and Rash

Fever in the Human Immunodeficiency Virus (HIV)Patient

Flaviviruses: Dengue

Free Living Ameba

Genital and mucous membrane lesions

Genital mycoplasmas, Ureaplasma

Giardia (see Chronic Diarrhea)

Haemophilus influenzae

Hanta virus, California Encephalitis (CE)

Hepatitis A Virus (HAV)

Hepatitis C Virus (HCV)

Herpes B virus

Herpes Simplex Virus (HSV)/Varicella Zoster Virus (VZV)

Herpes Simplex, including oral and labialis, encephalitis briefly (general)

Herpes Zoster, including varicella and virology

Histoplasmosis

Human T-Cell Lymphotropic Viruses Types I and II

Immune Reconstitution Inflammatory Syndrome

Infections in Recipients of Hematopoietic Cell Transplantation

Infections of the Female Pelvis

Infections of the oral cavity, neck, and head

Influenza Viruses

Initiating Antiretroviral Therapy

Intestinal Nematodes (Roundworm)

Intravascular Device infections, Septic Phlebitis/Arteritis

Invasive Candidiasis/Candidemia

JC polyomaviruses: Progressive Multifocal Leukoencephalopathy (Clinical Condition)

JC polyomaviruses: Progressive Multifocal Leukoencephalopathy (Microbiology)

Kaposi Sarcoma (KS)(Clinical Condition)

Kaposi’s Sarcoma (Microbiology)

Keratitis

Laryngitis

Legionella

Leishmania species

Leptospirosis

Listeria Monocytogenes and Listeriosis

Liver Disease in the HIV Patient

Liver, Intestinal and Lung Flukes

Lymphoma and Disseminated Castleman's Disease

Marburgviruses and Ebolaviruses

Measles Virus (Rubeola)

Mediastinitis

Melioidosis

Microsporidiosis (Clinical Condition)

Microsporidiosis (Microbiology)

Modifying Initial Therapy

Molluscum

Mononucleosis syndromes

Mycobacterium leprae

Mycobacterium tuberculosis

Myositis and Myonecrosis

Native valve Endocarditis (NV-IE), Non-IVDA

Neurologic Disease in the HIV Patient

Nocardia species

Noroviruses

Osteomyelitis

Other Bacillus sp (not anthracis)

Other Coryneforms

Other Yersinia species isolated from humans

Otitis Externa

Parameningeal Infections (other than brain abscess)

Pasteurella species

Peritonitis and Intraperitoneal Abscesses

Pertussis

Pharyngitis

Plasmodium species (Malaria)

Pleural Effusion and Empyema

Pneumocystis species

Pneumonic plague

Prevention of Infective Endocarditis

Prophylaxis and empiric therapy of Infection in Cancer patients

Prosthetic Joint Infection

Prosthetic Valve Endocarditis

Pruritic Papular Eruption (PPE) of HIV

Pulmonary Disease in the HIV Patient

Rabies

Rapidly Growing Nontuberculous Mycobacteria (NTM)

Renal Disease in the HIV Patient

Rhodococci

Rickettsia: Spotted fever group- RMSF, R. conori, R. africae, R. akari

Rickettsia: Typhus group – R. prowazekii, R. typhi

Rotaviruses

Rubella Virus

Salmonella species, including S. typhi

Schistosomiasis

Septic Arthritis/Infection native joints

Shigella species (bacillary dyentary)

Sinusitis

Slowly Growing Nontuberculous Mycobacteria (NTM)

Splenic Abscess

Sporothrix schenckii

Staphylococcus aureus (S. aureus)

Stevens Johnson Syndrome/Toxic Epidermal Necrolysis

Streptococcus agalactiae (Group B)

Streptococcus pneumoniae

Streptocococcus pyogenes

Strongyloides

Superficial Mycoses: Dermatophytosis

Syphilis/treponema pallidum

Tetanus

Tetanus

Tissue Nematodes, Trichinella, Dracuncula, Filaria

Toxoplasma gondii

Trichomonas

Trichomonas vaginitis

Tropical Sprue

Trypanosoma African

Trypanosoma American

Tularemia

Tularemia

Unusual helminth infections (Visceral/cutaneous Larva Migrans)

Urethritis

Urethritis

Urinary Tract Infection (UTI) in the Catheterized Patient

Urinary Tract Infection (UTI) in the Nursing Home Patient

Urinary Tract Infections (UTI): Pyelonephritis/Complicated

Varicella-Zoster Virus (VZV)

Vesicular Stomatitis Virus

Vibrio cholerae

Yersinia enterocolitica

Yersinia pseudotuberculosis

Zika Virus

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Pertussis